PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009101950.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
Family Nin-like
Protein Properties Length: 721aa    MW: 81013.8 Da    PI: 7.9006
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009101950.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK88.94.3e-28465515252
          RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                     ek+i+l+ l+++F++++kdAAk++gvc+T+LKriCRq+GI+RWP+Rkik++
  XP_009101950.1 465 EKDITLDILRQHFAGSLKDAAKNIGVCPTTLKRICRQHGISRWPSRKIKKV 515
                     799**********************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.041451535IPR003035RWP-RK domain
PfamPF020423.8E-25468515IPR003035RWP-RK domain
Gene3DG3DSA:3.10.20.2401.2E-17631717No hitNo description
SMARTSM006662.6E-19633720IPR000270PB1 domain
PROSITE profilePS5174521.308633720IPR000270PB1 domain
CDDcd064071.03E-33634717No hitNo description
SuperFamilySSF542771.04E-17634718No hitNo description
PfamPF005649.5E-15635718IPR000270PB1 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006107Biological Processoxaloacetate metabolic process
GO:0006108Biological Processmalate metabolic process
GO:0005515Molecular Functionprotein binding
GO:0050152Molecular Functionomega-amidase activity
Sequence ? help Back to Top
Protein Sequence    Length: 721 aa     Download sequence    Send to blast
MLASISSLAL TQSWLTNFIC RSLVHHILVN YLYFVCKYRG MLMQMEESNN SGVVDFPENF  60
MDQLLWEECR GEEEEVSLWS SLGLKERVTC AMGHLQEVMG GEKELLIQLW VPVERGMRRV  120
LSTEEQPYSL NLFSQSQSLA LYRDISAGYS FAAEVGSDQL VGLPGRVFLN RMPEWTPDVR  180
FFRSEEYLRI GYAHRCQVRA SLALPLFQGP SGTCMGVLEM ITTHPSLEYG SQLHTIHHAL  240
QAFDLRSSET SIVPTSLKPH TDDDLHREVA SILKGICISY GLPLAITWGH QQDSCLSAIV  300
SASYASDQNS RSFLDACSEH HLVAKEGIAG RAFATKKQYI AKDVAILSYP LSHYAKMFDL  360
HAALAIPLLT RYSRNVQFVL EFFFPRDYYC LINQRPILLA SQLSLRFQSS PHLMVDDDQL  420
KLAECMSRKG KGKDVSVSWE MREPSSFSSS SSSCLESRKR KRRDEKDITL DILRQHFAGS  480
LKDAAKNIGV CPTTLKRICR QHGISRWPSR KIKKVGHSLR KLQVVMDSVE GVQGSHHLAS  540
FYSSFPQLQS PLQLDPTKTV AKSPPPSSSS SSGSSTCCSS EEKDKQLGGG FHKPSSQVLL  600
TLGSSLMKDE QRPVRATSSL PPLPSARKAK DAGMKVHAMF GDSKMRMRLK HHWGIADLRR  660
EIAKGFGMDD DALTSNFTLK YMDDDEEWVL LTCDADLEEC IQIYKSSLYK ETVRISVSSL  720
L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1457462RKRKRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009101950.10.0PREDICTED: protein NLP3 isoform X2
SwissprotQ9SVF10.0NLP3_ARATH; Protein NLP3
TrEMBLA0A078IZE00.0A0A078IZE0_BRANA; BnaA06g40940D protein
TrEMBLM4EXM40.0M4EXM4_BRARP; Uncharacterized protein
STRINGBra033561.1-P0.0(Brassica rapa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38340.10.0Nin-like family protein